Pubblicazioni

Pubblicazioni peer reviewed

(sono riportate le 10 più importanti. L’elenco complete è disponibile su SCOPUS) (*These authors contributed equally to this work)

  1. Maria Valeria Esposito*; Bruno Fosso*; Marcella Nunziato*; Giorgio Casaburi; Valeria D'Argenio; Alessandra Calabrese; Massimiliano D'Aiuto; Gerardo Botti; Graziano Pesole; Francesco Salvatore. Microbiome composition indicate dysbiosis and lower richness in tumor breast tissues compared to healthy adjacent paired tissue, within the same women. BMC Cancer, 2022, 22(1), 30. Cited 25 times. https://www.scopus.com/record/display.uri?eid=2-s2.0-85122286737&origin=resultslist.

 

  1. Leoni, C.*, Volpicella, M.*, Fosso, B.*, Manzari, C., Piancone, E., Dileo, M.C.G., Arcadi, E., Yakimov, M., Pesole, G., Ceci, L.R. A differential metabarcoding approach to describe taxonomy profiles of bacteria and archaea in the saltern of margherita di savoia (Italy). (2020) Microorganisms, 8 (6), art. no. 936, pp. 1-20. Cited 20 times. https://www.scopus.com/inward/record.uri?eid=2-s2.0-85089770221&doi=10.3390%2fmicroorganisms8060936&partnerID=40&md5=cf405c22c3bd4b0f219c880e8fde44c1 DOI: 10.3390/microorganisms8060936

 

  1. Zagato, E., Pozzi, C., Bertocchi, A., Schioppa, T., Saccheri, F., Guglietta, S., Fosso, B., Melocchi, L., Nizzoli, G., Troisi, J., Marzano, M., Oresta, B., Spadoni, I., Atarashi, K., Carloni, S., Arioli, S., Fornasa, G., Asnicar, F., Segata, N., Guglielmetti, S., Honda, K., Pesole, G., Vermi, W., Penna, G., Rescigno, M. Endogenous murine microbiota member Faecalibaculum rodentium and its human homologue protect from intestinal tumour growth. (2020) Nature Microbiology, 5 (3), pp. 511-524. Cited 268 times. https://www.scopus.com/inward/record.uri?eid=2-s2.0-85078437762&doi=10.1038%2fs41564-019-0649-5&partnerID=40&md5=eb1bb292ba5e6ba55c006a263dec9508 DOI: 10.1038/s41564-019-0649-5

 

  1. Silvestris, D.A., Picardi, E., Cesarini, V., Fosso, B., Mangraviti, N., Massimi, L., Martini, M., Pesole, G., Locatelli, F., Gallo, A. Dynamic inosinome profiles reveal novel patient stratification and gender-specific differences in glioblastoma (2019) Genome Biology, 20 (1), art. no. 33. Cited 33 times. https://www.scopus.com/inward/record.uri?eid=2-s2.0-85061527176&doi=10.1186%2fs13059-019-1647-x&partnerID=40&md5=5267c630c66f261283750f5836372ade DOI: 10.1186/s13059-019-1647-x

 

  1. Santamaria, M.*, Fosso, B.*, Licciulli, F., Balech, B., Larini, I., Grillo, G., De Caro, G., Liuni, S., Pesole, G. ITSoneDB: A comprehensive collection of eukaryotic ribosomal RNA Internal Transcribed Spacer 1 (ITS1) sequences (2018) Nucleic Acids Research, 46 (D1), pp. D127-D132. Cited 26 times. https://www.scopus.com/inward/record.uri?eid=2-s2.0-85042545097&doi=10.1093%2fnar%2fgkx855&partnerID=40&md5=5fca74252ab72193e1608645826f398c DOI: 10.1093/nar/gkx855

 

  1. Fosso, B., Santamaria, M., D'Antonio, M., Lovero, D., Corrado, G., Vizza, E., Passaro, N., Garbuglia, A.R., Capobianchi, M.R., Crescenzi, M., Valiente, G., Pesole, G. MetaShot: An accurate workflow for taxon classification of host-associated microbiome from shotgun metagenomic data (2017) Bioinformatics, 33 (11), pp. 1730-1732. Cited 18 times. https://www.scopus.com/inward/record.uri?eid=2-s2.0-85019252945&doi=10.1093%2fbioinformatics%2fbtx036&partnerID=40&md5=e3de7538d74efb6f3f220b6a27f47b75 DOI: 10.1093/bioinformatics/btx036

 

  1. Fosso, B., Santamaria, M., Marzano, M., Alonso-Alemany, D., Valiente, G., Donvito, G., Monaco, A., Notarangelo, P., Pesole, G. BioMaS: A modular pipeline for Bioinformatic analysis of Metagenomic AmpliconS (2015) BMC Bioinformatics, 16 (1), art. no. 203, . Cited 45 times. https://www.scopus.com/inward/record.uri?eid=2-s2.0-84938973497&doi=10.1186%2fs12859-015-0595-z&partnerID=40&md5=16fff84d5e8624a5dbd8eff3044445a9 DOI: 10.1186/s12859-015-0595-z

 

  1. Fransen, F., Zagato, E., Mazzini, E., Fosso, B., Manzari, C., El Aidy, S., Chiavelli, A., D'Erchia, A.M., Sethi, M.K., Pabst, O., Marzano, M., Moretti, S., Romani, L., Penna, G., Pesole, G., Rescigno, M. BALB/c and C57BL/6 Mice Differ in Polyreactive IgA Abundance, which Impacts the Generation of Antigen-Specific IgA and Microbiota Diversity (2015) Immunity, 43 (3), art. no. 3154, pp. 527-540. Cited 215 times. https://www.scopus.com/inward/record.uri?eid=2-s2.0-84941647683&doi=10.1016%2fj.immuni.2015.08.011&partnerID=40&md5=0282f902d0cd2b6394ed2f53a9f60e73 DOI: 10.1016/j.immuni.2015.08.011

 

  1. Manzari, C.*, Fosso, B.*, Marzano, M.*, Annese, A., Caprioli, R., D’Erchia, A.M., Gissi, C., Intranuovo, M., Picardi, E., Santamaria, M., Scorrano, S., Sgaramella, G., Stabili, L., Piraino, S., Pesole, G. The influence of invasive jellyfish blooms on the aquatic microbiome in a coastal lagoon (Varano, SE Italy) detected by an Illumina-based deep sequencing strategy (2015) Biological Invasions, 17 (3), pp. 923-940. Cited 59 times. https://www.scopus.com/inward/record.uri?eid=2-s2.0-84925496272&doi=10.1007%2fs10530-014-0810-2&partnerID=40&md5=ecedd2091232f1026c2cf8e7d1fe7001 DOI: 10.1007/s10530-014-0810-2

 

  1. Santamaria, M.*, Fosso, B.*, Consiglio, A., De caro, G., Grillo, G., Licciulli, F., Liuni, S., Marzano, M., Alonso-alemany, D., Valiente, G., Pesole, G. Reference databases for taxonomic assignment in metagenomics (2012) Briefings in Bioinformatics, 13 (6), art. no. bbs036, pp. 682-695. Cited 77 times. https://www.scopus.com/inward/record.uri?eid=2-s2.0-84869045574&doi=10.1093%2fbib%2fbbs036&partnerID=40&md5=6d9c62b461fa4d7229ecebc3c33a3401 DOI: 10.1093/bib/bbs036

 

Capitoli in Libri

  1. Fosso B, Marzano M, Santamaria M.; (2015) “e-DNA Meta-Barcoding: From NGS Raw Data to Taxonomic Profiling.”RNA Bioinformatics, Chapter: 16, Publisher: Springer New York, Editors: Ernesto Picardi, pp.257-278. doi: 10.1007/978-1-4939-2291-8_16.
pubblicato il 23/11/2023 — ultima modifica 24/07/2024

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