Pubblicazioni
Recent publications
Palese LL. Oxygen-oxygen distances in protein-bound crystallographic water suggest the presence of protonated clusters. Biochim Biophys Acta Gen Subj. 2019; 1864(3):129480. doi: 10.1016/j.bbagen.2019.129480.
Signorile A, De Rasmo D, Cormio A, Musicco C, Rossi R, Fortarezza F, Palese LL, Loizzi V, Resta L, Scillitani G, Cicinelli E, Simonetti F, Ferretta A, Russo S, Tufaro A, Cormio G. Human Ovarian Cancer Tissue Exhibits Increase of Mitochondrial Biogenesis and Cristae Remodeling. Cancers (Basel). 2019; 11 pii: E1350. doi: 10.3390/cancers11091350.
Capitanio G, Palese LL, Papa F, Papa S. Allosteric cooperativity in proton energy conversion in A1-type cytochrome c oxidase. J Mol Biol. 2019; in press. doi: 10.1016/j.jmb.2019.09.027.
Gnoni A, De Nitto E, Scacco S, Santacroce L, Palese LL. A New Look at the Structures of Old Sepsis Actors by Exploratory Data Analysis Tools. Antibiotics (Basel). 2019; 8. pii: E225. doi: 10.3390/antibiotics8040225.
Palese LL. Explaining leak states in the proton pump of heme-copper oxidases observed in single-molecule experiments. Biophys Chem. 2019; 256:106276. doi: 10.1016/j.bpc.2019.106276.
Palese LL. Cytochrome c oxidase structures suggest a four-state stochastic pump mechanism. Phys Chem Chem Phys. 2019; 21:4822-4830. doi:
10.1039/c8cp07365a.
Maida I, Zanna P, Guida S, Ferretta A, Cocco T, Palese LL, Londei P, Benelli D, Azzariti A, Tommasi S, Guida M, Pellacani G, Guida G. Translational control mechanisms in cutaneous malignant melanoma: the role of eIF2α. J Transl Med. 2019; 17:20. doi: 10.1186/s12967-019-1772-z.
Palese LL. A random version of principal component analysis in data clustering. Comput Biol Chem. 2018; 73:57-64. doi: 10.1016/j.compbiolchem.2018.01.009.
Bianco A, Palese LL, Guerriero S, Petruzzella V. Increased mtDNA copy number protects against LHON. Invest Ophthalmol Vis Sci. 2018; 59(1):331. doi: 10.1167/iovs.17-22822.
Palese LL. Analysis of the conformations of the HIV-1 protease from a large crystallographic data set. Data Brief. 2017; 15:696-700. doi: 10.1016/j.dib.2017.09.076.
Palese LL. Conformations of the HIV-1 protease: A crystal structure data set analysis. Biochim Biophys Acta. 2017; 1865:1416-1422. doi: 10.1016/j.bbapap.2017.08.009.
Bianco A, Bisceglia L, Russo L, Palese LL, D'Agruma L, Emperador S, Montoya J, Guerriero S, Petruzzella V. High mitochondrial DNAcopy number is a protective factor from vision loss in heteroplasmic Leber's hereditary optic neuropathy (LHON). Invest Ophthalmol Vis Sci. 2017; 58:2193-2197. doi: 10.1167/iovs.16-20389.
Palese LL. Protein states as symmetry transitions in the correlation matrices. J Phys Chem B. 2016;120(44):11428-11435. doi: 10.1021/acs.jpcb.6b09216.
Salerno C, Benndorf D, Kluge S, Palese LL, Reichl U, Pollice A. Metaproteomics applied to activated sludge for industrial wastewater treatment revealed a dominant methylotrophic metabolism of Hyphomicrobium zavarzinii. Microb Ecol. 2016; 72:9-13. doi: 10.1007/s00248-016-0769-x.
Palese LL. Correlation analysis of trp-cage dynamics in folded and unfolded states. J Phys Chem B. 2015; 119:15568-73. doi: 10.1021/acs.jpcb.5b09678.
Palese LL. Random matrix theory in molecular dynamics analysis. Biophys Chem. 2015 Jan; 196:1-9. doi: 10.1016/j.bpc.2014.08.007.
Abbrescia A, Martino PL, Panelli D, Sardanelli AM, Papa S, Alifano P, Palese LL, Gaballo A. The respiratory chains of four strains of the alkaliphilic Bacillus clausii. FEBS Open Bio. 2014; 4:714-21. doi: 10.1016/j.fob.2014.07.009.
Bossis F, De Grassi A, Palese LL, Pierri CL. Prediction of high- and low-affinity quinol-analogue-binding sites in the aa3 and bo3 terminal oxidases from Bacillus subtilis and Escherichia coli1. Biochem J. 2014; 461:305-14. doi: 10.1042/BJ20140082.
Bossis F, Palese LL. Amyloid beta(1-42) in aqueous environments: effects of ionic strength and E22Q (Dutch) mutation. Biochim Biophys Acta. 2013; 1834:2486-93. doi: 10.1016/j.bbapap.2013.08.010.
Lobasso S, Palese LL, Angelini R, Corcelli A. Relationship between cardiolipin metabolism and oxygen availability in Bacillus subtilis. FEBS Open Bio. 2013; 3:151-5. doi: 10.1016/j.fob.2013.02.002.
Palese LL. Protein dynamics: complex by itself. Complexity 2013; 18:48-56. doi: 10.1002/cplx.21434.
Palese LL, Bossis F. The human extended mitochondrial metabolic network: new hubs from lipids. Biosystems 2012; 109:151-8. doi: 10.1016/j.biosystems.2012.04.001.
Capitanio N, Palese LL, Capitanio G, Martino PL, Richter OM, Ludwig B, Papa S. Allosteric interactions and proton conducting pathways in proton pumping aa(3) oxidases: heme a as a key coupling element. Biochim Biophys Acta. 2012; 1817:558-66. doi: 10.1016/j.bbabio.2011.11.003.
Kuhn R, Benndorf D, Rapp E, Reichl U, Palese LL, Pollice A. Metaproteome analysis of sewage sludge from membrane bioreactors. Proteomics. 2011; 11:2738-44. doi: 10.1002/pmic.201000590.
Bossis F, Palese LL. Molecular dynamics in cytochrome c oxidase Mössbauer spectra deconvolution. Biochem Biophys Res Commun. 2011; 404:438-42. doi: 10.1016/j.bbrc.2010.11.140.
For a complete list of older publications visit my ORCID profile at